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After discussion with Kassian and Paschalia we have concluded on the following possible way of auto-detecting the value that should be used as minimum branch length threshold by the user.
The method …
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Subtrees consisting only of very short branch lengths (shorter than the specified `--min_br`) should never be proposed as coalescent roots in the bayesian proposals. It should be incorporated in both …
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Export the node support values generated from Bayesian runs into a tree into the [extended newick](http://dmi.uib.es/~gcardona/BioInfo/enewick.html) format:
`[label]#[type]tag[:branch_length]`
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Hello everyone,
since yesterday afternoon I'm having a big problem with Ilastik: it cannot load my videos anymore in the Pixel Classification workflow, so I cannot proceed with segmentation or trackin…
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As currently implemented, the SH-like test requires the tree being tested to be NNI optimal, and will actually find a better tree if possible. However, this does not allow for targeted hypothesis test…
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I have an example with a very small alignment (see below) where I want the likelihood for three alternative topologies (see below). All of this is using the most recent pull from github (Standard RAxM…
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We established two new evaluation features:
```
./eval/calculate_distances.py hist-model eval/res/results/*/*.result
./eval/calculate_distances.py hist-model-per-ic eval/res/results/*/*.result
```
T…
mhoff updated
9 years ago
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University of Heidelberg
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1、http://dsv.su.se/en/research/research-areas/health/projects/detect-hai-1.113070
从非结构化的自然语言中检测院感的发生