stamatak standard-RAxML issues

stamatak / standard-RAxML

www.exelixis-lab.org

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issues

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axml.c: fix macros for powerpc

#76 barracuda156 closed 1 month ago
0
doc: fix typos in readme

#75 corneliusroemer closed 1 month ago
0
ERROR: Sequences out of alignment

#74 ShanfenO closed 6 months ago
1
problem about the number of expected states is 20 the number of states that are present is 19.

#73 jianshu93 closed 8 months ago
1
which version is best for me?

#72 liamxg closed 9 months ago
3
Add support for Linux ARM64 to the Makefile.SSE3.** configs

#71 martin-g closed 11 months ago
4
Add support for Linux ARM64

#70 martin-g closed 11 months ago
5
Can not install raxmlHPC-MPI-AVX

#69 1835033964 closed 1 year ago
1
Missing bootstrap values

#68 cahuparo closed 1 year ago
1
likelihood failed

#67 Lcornet closed 1 year ago
1
Main

#66 gmellison closed 1 year ago
0
Format the document to make it easy to read

#65 AethoceSora closed 11 months ago
1
Should assemblies be removed if core gene alignment shows redundancies?

#64 chahatupreti closed 1 year ago
1
Why Raxml is taking too long to prepare a tree

#63 krishna1925 closed 11 months ago
1
problems with memory

#62 pavlo888 closed 2 years ago
1
RAxML can't, parse the alignment file as phylip file

#61 Jun666Yang closed 2 years ago
2
Can't compile RAxML on Linux (Ubuntu 20.04)

#60 Tomas-Pe closed 2 years ago
1
Adding branch length and bootstraps to a consensus tree

#59 npbhavya closed 11 months ago
3
How to use RaXML with fasta input file.

#58 sekhwal closed 2 years ago
2
Change exit code

#57 jtklein closed 11 months ago
1
Exit code 0 thrown albeit error in ancestral state reconstruction

#56 jtklein closed 2 years ago
1
Multithread and Resume - Reg.

#55 bioramg closed 11 months ago
1
Packaging RAxML

#54 V-Z closed 3 years ago
5
Custom tree roots

#53 lipeng-j closed 11 months ago
1
Estimate branch length with a fixed tree

#52 lychen83 closed 11 months ago
1
redundancy in genetic distance output

#51 boristim66 closed 11 months ago
1
Use "SIMD Everywhere" to enable wider portability

#50 mr-c closed 11 months ago
5
Kappa calculation from RAxML output.

#49 maesaar closed 4 years ago
1
How to set the model parameter for GTR+F+I?

#48 liufuyan2016 closed 4 years ago
2
how to generate a binary tree?

#47 haojingshao closed 4 years ago
1
Misleading output in RAxML_info w/ options -f e -m GTRCAT

#46 tamuri closed 11 months ago
3
No tree file output

#45 TarsLi closed 6 years ago
2
--flag-check gives succesful exit with unsupported option

#44 ChrisHIV closed 7 years ago
1
Remove #include <malloc.h>

#43 nathanweeks closed 7 years ago
2
optimizeModel.c:123: setRateModel: Assertion `rate >= 0.0001 && rate <= 1000000.0' failed.

#42 idavydov closed 7 years ago
2
axml.h file

#41 giriarteS closed 7 years ago
1
"ore" -> "or" in doc (-f g and -f G)

#40 josephwb closed 7 years ago
1
Assertion error when using single-threaded AVX

#39 mbakke closed 8 years ago
2
periodically flush stdout

#38 swofford closed 8 years ago
1
epa slow and fast placement algorithms

#37 GuangchuangYu closed 8 years ago
1
Update axml.c

#36 hyphaltip closed 8 years ago
1
Fixed numerical error for large number of taxa and added comments

#35 lutteropp closed 8 years ago
0
Fixed numerical error for large number of taxa and added comments

#34 lutteropp closed 8 years ago
1
Implemented faster quartet sampling algorithm

#33 lutteropp closed 8 years ago
1
Core dumped when adding bipartition information to a tree

#32 jgerken closed 8 years ago
4
fix parenthesis mismatch bug leads to potential unexpected behavior

#31 hrabe closed 8 years ago
0
Reformat code and fix parenthesis mismatch bug leads to potential unexpected behavior

#30 hrabe closed 8 years ago
0
Wrong parenthesis level leads to potentially broken code

#29 hrabe closed 8 years ago
1
Add qualified .gitignore file

#28 hrabe closed 8 years ago
0
Missing .gitignore file to specify files intentionally not to be tracked

#27 hrabe closed 8 years ago
1