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Got this error for about half of subjects
> Node: fmriprep_22_0_wf.single_subject_20_wf.anat_preproc_wf.surface_recon_wf.autorecon1
> Working directory: /scratch1/03201/jbwexler/work_dir/fmriprep/…
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Continuing from https://github.com/mne-tools/mne-python/issues/11257#issuecomment-1288857665 with @georgeoneill
> > coreg -- we plan to support OPM coregistration, probably through the existing mne…
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We’re trying to organize our ex vivo MRI data into BIDS-compliant format, and are facing issues with our B1+ maps.
We are not using any of the standard B1+ mapping protocols listed [in the qMRI app…
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Rohlfing's experiment consists on registering 306 pairs of manually annotated MRI (IBSR) and measure the quality of the registration in terms of the average Jaccard index of each anatomical region. Ri…
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- I am trying to convert Bruker CSI data to Nifti. Everything looks OK, except for the excited CSI grid. How I can store it in Nifti? Do you think it is possible? should I use a sidecar file like json…
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**Describe the bug**
VipT1BiasCorrection ends with error 111 and many error messages.
**To Reproduce**
Steps to reproduce the behavior:
1. Download files:
- [BB339F.nii.gz](https://github.c…
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## Project info
**Title:**
Macapype: external pipelines
**Project lead and collaborators:**
- David Meunier
- Kepkee Loh
- Julien Sein
- Bastien Cagna
- Olivier Coulon
**Description:…
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Hi all,
Here is my problem: I can't project mixed source estimate data onto a PySurfer Brain object. The estimate was calculated for a source space defined on rois=['ctx_lh_G_precentral', 'ctx_lh_G…
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Many source localisation methods exist, each with their parameter choices and idiosyncrasies. However, some basic steps are common to all methods (more or less?). I'd like to see a Wiki-page (with a s…
cjayb updated
8 years ago
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About half the subjects had similar errors:
> data/freesurfer/sub-MP02312/mri/orig/001.mgz /scratch1/03201/jbwexler/openneuro_derivatives/derivatives/fmriprep/ds003669-fmriprep/sourcedata/f…