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- Write 2-D version of binless WHAM
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Hello, is the native WHAM code associated with Plumed capable of working with multiple CVs/dimensions?
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First of all, thanks a lot for tackling all of modern C++ building/packaging issues and for tremendous effort put into this project!
This is the first build system since Make that gave me hope for …
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From the 4 available kernels, ``binless_tophat`` and ``binless_gauss`` cannot be used. The following error is raised:
![image](https://user-images.githubusercontent.com/45241990/112629964-43fd0b80-…
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I took a look at the queued 0.7.2 package and I see a few issues that you may want to fix before I publish it:
1. Since this library's header installs directly into `include` (e.g., `/usr/include/`…
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Hello tidyvpc developer,
I encountered this error message just today. I believe the same code works several days ago. Were there changes made on the package in the past week that might cause this err…
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Useful for future debugging purposes
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Hello professor,
The server I used had 512 Gb of memory. I took two 10M ChIA-PET data as input, not Hi-C data. When I ran preprocessing.R, everything went well. But when I ran the optimized_binless.…
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Hi,
I, Ajay Kumar Saw, a research scholar in IISER, Pune, India.
I am trying to run binless protocol. I successful run preprocessing.R, optimized_binless.R and fast_binless.R but I stuck in "chrom…
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Dear Yaqiang,
I am interested in using cLoops on our HiC data, which has been processed using TADbit and binless. Unfortunately, neither of these programs produces a BEDPE file, so I am a bit at a …