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## *Repository Creation Request for Bioinformatics and Computational Biology*
1. #### Coordinating Institute: Amrita Vishwa Vidyapeetham
2. #### Approver’s Name: Dr. Shyam Diwakar
3. #### …
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Hey guys. I have recently started to adapt a bunch of code that my lab has developed to make use of skbio instead of our own bioinformatics library. One of the features we use a lot in our projects is…
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### Data Owner Name
FogMeta Lab
### Data Owner Country/Region
China
### Data Owner Industry
Web3 / Crypto
### Website
https://fogmeta.com
### Social Media
```text
Twitter: https://twitter.com…
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Based on the discussion and what we intend to do, the collection of the specific amount of data matters. The whole idea is to limit the extra fields so that things can stay on one road for the sake of…
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Inter-omics networks link bio-molecules of different types. They are constructed using biological a priori information showing presence of TF binding sites or H4K12ac epigenetic marks in the promoter …
Sbs12 updated
7 months ago
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Buzzwords: containers, Docker, Singularity, dependency hell
Problem: Images are limited to having 10 GB installs. Generally this isn't a problem, but with tools that require databases to run (e.g. …
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Hi Mike, we're seeing quite low alignment metrics in paired-end samples, and I'm wondering if it's normal behavior. Typically, we're seeing alignment of around 50% of reads, compared to the total read…
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I worry about the case sensitivity of curies such as
NCBITaxon:9606
i would recommend that identifiers adopt a single case (upper or lower), as it would likely reduce errors. In Bio2RDF, we adopt l…
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> http://dx.doi.org/10.1371/journal.pone.0141287
>
> **Motivation:** We introduce a new representation and feature extraction method for biological sequences. Named bio-vectors (BioVec) to refer to…
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Dear Mohamed,
Thanks for the examples, but I'm still running into some problem to run CATCh. Perhaps you could point me to new tests? I am running some samples in my desktop, but the Databases are …