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See:
- [DATA ROADMAPS & TOOLBOX — Data Science for UN Sustainable Development Goals](http://www.data4sdgs.org/data-roadmaps-toolbox/)
- [What is ‘BON in a Box’? – GEO BON](http://geobon.org/bon-in-a-b…
bbest updated
7 years ago
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Currently (without the cosmology example) the `Snakemake` part is a bit thin. We should at least explain wildcards and the `expand` function.
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Hi there,
This is a semi-automated message from a fellow bioinformatician. Through a GitHub search, I found that the following source files make use of BLAST's `-max_target_seqs` parameter:
- [exam…
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Hi there,
This is a semi-automated message from a fellow bioinformatician. Through a GitHub search, I found that the following source files make use of BLAST's `-max_target_seqs` parameter:
- [crea…
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**Abstract:** Contemporary biology is moving towards heavy reliance on computational methods to manage, find patterns, and derive meaning from large-scale data, such as genomic sequences. Biology teac…
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Using this issue to remind myself, as I go through each of the bioinformatics workflows and try to get them working with P$, that each one is probably calling slightly different system calls. Obviousl…
krs85 updated
2 years ago
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### Description:
I'm encountering an issue when trying to run a Snakemake workflow that involves creating a Conda environment using Mamba. The workflow attempts to create a Conda environment from a…
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The README should include the source of a simple Biokepi pipeline (align FASTQs, call germline variants) and link to a tutorial which highlights the use of common bioinformatics tools.
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Hello,
Just wanted to point out a bioinformatic challenge with downstream data processing. Your tool seems to leave the "symbol5" or "symbol3" field blank on occasion:
```
gene5 chrom5 stran…
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**A reproducible template workflow for single-cell DNA methylation data**
DNA methylation is a heritable epigenetic mark that shows a strong correlation with transcriptional activity, and may be de…