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Hi,
Thank you for the great software!
I wonder if the consistency of cell type proportion can be used to evaluate the success of cell type deconvolution in my study. I observe the following re…
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Thanks for publishing your seurat object!
I took a look at the MNP-VERSE seurat object and I noticed the following things:
1. In the paper's methods section you described that 6 studies were exclu…
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Hello, I am trying to run a cell annotation based on reference datasets of interest and I am having some issues. When I try to specify a particular dataset for example with peripheral blood, it gives…
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Entered "mouse red blood cell" as query text.
Clicked on "Gene expression" data type facet
18 results
17 of those are returned from ArrayExpress but represent studies from GEO.
Of those 17 one was als…
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Trained on the bloodcell dataset, multi label class loss plateau at epoch of 10 by the value of ~80 and is still ~80 at epoch of 50, but the other loss (xywh and objectiveness loss) are able to reach …
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I run the tutorial dataset and I want to only calculate certain cell type interactions. For example:
sender = c(1,2,3,4)
receiver = c(5,6,8)
cellchat
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Hi,
Thanks for all the work on this tool. I am having trouble getting results for the blood tissue (I did loaded the specific tissue related drugs). I tried a few other tissue types including breas…
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Good day!
I have a question about whether I should or not use the `population.size = TRUE` parameter when calling `computeCommunProb`. I am integrating data from different platforms, and some sourc…
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Look in both the lectures and labs
Also check the homeworks, though I believe those datasets are unique to the homework
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Hi!
It's a bye but I would like to know the origin of the dataset. Namely if it comes from malaria patients.