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I am having this error. I have moved the train_ddpm.py and train_vqgan.py file in the medicaldiffusion-master directory. My dataset is also in the same directory.
**My given command was:**
`PL_TOR…
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Hiiii Wenxuan. Thanks a lot for your nice work sharing!
I have a question for performance reproducing on Brats 2019 dataset using your codes of TransBTS model. I directly run the train and test codes…
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The raw images:
![T1](https://github.com/WuJunde/MedSegDiff/assets/61675340/8b6ed862-1a3b-4130-9733-05c1b9f207d9)
![visdom_image (3)](https://github.com/WuJunde/MedSegDiff/assets/61675340/011ada15…
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* Name of dataset: Brain Tumor Segmentation Data
* URL of dataset: [https://ieee-dataport.org/competitions/brats-miccai-brain-tumor-dataset]
* Citation: [1] B. H. Menze, A. Jakab, S. Bauer, J. Kalpa…
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Hi Sara,
I would like to know the directory structure for the BRATS dataset .. I mean how do you actually run it .Please suggest some pointers on this.
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Hello,
I trained BTCV on a single V100 GPU with a random data split ratio of 4:1, using a batch size of 1 and training for 3000 epochs. However, my mean dice score is only 0.2. Do you have any good…
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Hello! I would really appreciate your help. Thank you very much for the excellent work. I was trying to test the network mentioned in the title using 3UNet (python train_uncertainty_aware_mean_teacher…
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My dataset folder is as follows:
brats2018
-----MICCAI_BraTS_2018_Data_Training
----HGG
----LGG
-----MICCAI_BraTS_2018_Data_Validation
----HGG
----LGG
I can't run…
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### UNN_BraTS23/scripts/data_class.py
**lines: 41-69**
Should this section not account for when mask does not exist?
_see code change suggestion in docstring at end_
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Hi,
I'm trying to finetune nnUNet for a brain tumor segmentation task using pretrained weights from Task082_BraTS2020. My data consists of brain MRI images with 4 input modalities, and the labels m…