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Good day,
I am testing all deconvolution tools implemented in `omnideconv` and have encountered issues when building the model with Scaden.
When using
```
save_path
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HI I am trying to create the plot using the following command
res
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Dear @npklein
Thanks for your great tool!
I want to use Decon-qtl to find cell-type eQTL with cibersort results,But I find no significant p-value after B-H correction. Most p-value in result…
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Please briefly describe your problem and what output you expect. If you have a question, please don't use this form.
Instead, ask on our [Community Forum](https://github.com/icbi-lab/immunedeconv/dis…
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Hello, I'm currently using BayesPrism for deconvolution and I have a question.
I'm working with single-cell sequencing data, which includes an equal amount of tumor cells and normal (non-tumor) cel…
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Hi folks,
I am using the exact same code and environment listed in
https://github.com/icbi-lab/immunedeconv/issues/86
When I run using the 'xcell' subcommand I get the following error:
```
>…
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>>>=== The 'pattern' parameter must be defined...
一直报错，更新重启都无法解决
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https://mp.weixin.qq.com/s?__biz=MzIyMzA2MTcwMg==&mid=2650734689&idx=1&sn=d6727cd63a271aec269992d4d432f8e5&scene=21#wechat_redirect
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Hi everyone
I'm working with cibersort in R, i downloaded this database from pubmed GSE33814, after some cleaning process I got the matrix with gene names as row names and patients as columms. but …
ghost updated
2 years ago
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Hello, in the “feature. select. new” function, “CellLines” When is matrix set to NULL? If I want to deconvolute the methylation cell type of esophageal cancer, do I need to input the methylation matri…