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Hi, guys, I deployed netchop locally, but it seems don't work. Have you bumped into the similar problems before?
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paste: 2134/32138/hmm.inp: No such file or directory
sh: line 1: /hmm.inp: No …
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Hi, I tried the example you have in the readme for running with docker. I get the following error (I am on a arm Mac, but it doesn't look like that's the issue):
Status: Downloaded newer image fo…
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Need to curate some alternative transcript examples for Chado loading
can do some from the gene expression list:
gene expression, alternative splicing (3)
gene expression, alternative transcri…
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Hi !
I am trying tu use msCENTIPEDE to generate TF footprints for several ATAC-seq data sets i've produced.
I wanted to have general advices on how to achieve the most accurate workflow.
So far, w…
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Hi,
I am using guppy+remora+modkit to detect a deaza DNA modification on G. This modification was successfully detected by Tombo before. I have two samples of DNA, modification minus control and m…
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when I add extra protease myself, it will directly flash back and cause the software to no longer open, I hope to solve this problem. If possible, it is hoped that the system can come with the enzyme …
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Dear Miguel,
Hello, Miguel. Recently I asked you a question about how to analyze a library sequenced by smRNA-Seq Kit.
When I asked you a question, at first I thought my library is suitable for p…
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Please provide as much information as you can:
* **GO term ID label:**
GO:0035516 broad specificity oxidative DNA demethylase activity IEA with PTHR16557:SF2
~GO:0035552 oxidative single-stran…
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I tried running the latest version over some timsTOF-pro data containing phospho-enriched peptides
```
diann.exe --f "F:\promec\TIMSTOF\LARS\2024\241002_zrimac\zr_IMAC_100ug_zoom20_1dia_25pepsep_S1-…
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Where is the instructions to make these datasets?