-
Is there a way to export the list of genes that are differential between (Specific to) clusters after a simple run, without the raw RDS file? I unfortunately don’t have access to the raw data currentl…
-
Not really a big issue but I found out Zookeeper chroot's can't be used with Ambry. For example using the following connection string to chroot Ambry in Zookeeper in `/ambry-misc`:
```
zookeeper-1.f…
-
Hi @heihaizhengdong , I'd like to know what's the meaning of `plot_with_dapi` in most clustermap functions? In my opinion, if it is set to `False` then the spots overlapping with dapi will be discarde…
-
I swapped react native maps with this and it works well but it only show locations marked in my city not the rest of the map, but rendering with MapView of react native maps show all locations. Is the…
-
Hi Ursky.
I encountered some error in the quant_bin module.
I ran assembly with megahit with -l 500 option, and in the binning module i use concoct only. So I have only one bin set A(from concoct)…
-
Hi everyone,
I'm new here and I'm trying to install Ambry on my machine. These are the steps that I executed:
**$ git clone https://github.com/linkedin/ambry.git
$ cd ambry
$ ./gradlew allJar
…
-
**Checklist:**
- [X] Check for duplicate issues. Please file separate requests as separate issues on GitHub.
- [X] Describe the feature's goal, motivating use cases, and its expected behavior.
- [n…
-
Enhancement suggestion: Adding optimal leaf ordering as an option for `clustermap`
Background:
Many users are unaware that the leaf ordering in hierarchical clustering without any explicit leaf or…
votti updated
3 years ago
-
FigureFirst looks like a very exciting project, your have identified a major pain point for many people.
I was looking through the documentation, and I was wondering if you had any suggestions for …
jfear updated
5 years ago
-
Dear all,
I have tested scgenome.snvphylo.snv_hierarchical_clustering_figure function:
+ Function work well with 1 library data (snv_data, snv_count_data) as input.
+ But if I combine many …