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[//]: # (You can add comment regarding your issue hereafter)
### Comments
- tiny change to definition
- link with topics = epigenetics, epigenomics
[//]: # (End of issue comments)
### Hereafte…
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Requirements for each workflow
- Adding description in meta
- Adding Ref map file location to description (indicate this is for inter-organizational use: private)
- Adding input description in para…
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## Description
As a bioinformatician, I would like to run the complete workflow, including generating QC plots, pairwise clustering, regional methylation, and DMR analysis on the Guo 2013 data set,…
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https://github.com/CEGRcode/EGC_utility_scripts
dshao updated
2 years ago
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Hi,
I am encountering a weird bug after inputting my data when I start the p-value normalization steps.
The annotateExpression and annotateModification steps work fine, so does the makePvalueObj…
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after TSCC is normal
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## Description
As a bioinformatician, I would like to run the complete workflow, including generating QC plots, pairwise clustering, regional methylation, and DMR analysis on the Farlik 2015 data s…
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script prepare and be able to launch processing with standard parameters.
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- [x] a pbs script to launch coolAdmin pipeline (stable version) that taking parameters (`lib_id`) and this script i…
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Step1 : make fastq files
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* [ ] transfer data from IGM/other sources: can ftp or symbolic links to folder `/ps-epigen/seqdata/IGM`,`/ps-epigen/seqdata/silencer`
* [x] need check or update s…