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**Describe the bug**
AntiSMASH (v7.1.0) doesn't like the string length of a valid NCBI GFF feature type: `ribosome_entry_site`
The message:
`ERROR: feature type has invalid length: 'ribosome_entr…
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Hi,
In the example above I can see proteins FASTA file of GCF_009025895.1_virus_proteins.faa. I want to calculate the gene abundance with virus gene sequence.Can we output the corresponding nucleo…
wfgui updated
2 weeks ago
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As reported in https://github.com/googleapis/nodejs-firestore/issues/1943, `@google-cloud/firestore` used in GCF in REST mode `{preferRest: true}`, which translates to `{fallback: 'rest'}`, often resu…
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Hi there,
I was testing LiftOff and LiftOn to see which one is "best" for genome annotation. I was looking at some RefSeq genomes, lifting the brown-headed cowbird and red-winged blackbird onto the…
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I tried to run snippy with the following genbank file:
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/632/635/GCF_008632635.1_ASM863263v1/GCF_008632635.1_ASM863263v1_genomic.gbff.gz
However, the p…
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I was updating kaptive to version 3.0.0b1, and noticed that this version doesn't appear to work with these gbk files anymore.
What I ran:
```
wget -q https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/…
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I am familiar with the term GCF Greatest Common Factor not GCD.
I think that the parentheses should be shown in the problem not just in the steps to the solution.
LCD and so on. I think that maybe in …
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I have an org policy to set everything in Canada only, managed to deploy my firebase function in the target location but it seems that clean up of the container is pointing to a default registry in us…
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I appeared to come across a fixable issue to do with the Numerical Recipes routine. My log says
FATAL ERROR -
a too large, ITMAX too small in gamma countinued fraction (gcf)
so the -1.info file…
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### Impacted tests
- TestAccCloudFunctionsFunction_buildServiceAccount
### Affected Resource(s)
- google_cloudfunctions_function
### Failure rates
- 60% since 2024-07-11
### Message(s)
``…