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I queried metadata for my PhD thesis using it's ISBN:
```
curl --silent \
--data 9781339919881 \
--header 'Content-Type: text/plain' \
http://127.0.0.1:1969/search | jq
```
This return…
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I have been building hetnets for MSigDB at https://github.com/greenelab/interpret-compression and have been using MSigDB collection names for hetio metagraph IDs.
However, I am receiving an error i…
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Check out the `xarray` package (https://github.com/pydata/xarray) to store hetnets as a multidimensional array.
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Hi,
I sent an email to Daniel asking three broad questions about Hetionet that I was interested in for my research. He asked me to post this as a Github issue, so I'm writing them here.
1. Wha…
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We are considering creating another base representation of hetnets. One of the main goals is to facilitate faster network loading, which at present can take over a minute and a half to load a graph.
…
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Currently Pubtator uses MeSH ids for disease and compound mentions, but for our interests we will need to convert these ids into the same ids hetnets are using. @dhimmel let me know if you want to gra…
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In, the past, we've permuted hetnets via the hetio package. We have also [explored](https://thinklab.com/d/136) a Cypher implementation. The method we use is called XSwap as described in:
> [**Rand…
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Dear Uzair, Thank you for sharing your work on GitHub. Is there any Publication associated with this so as to enable us to understand the work in more depth (needless to say, integrity of the document…
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This is a very brief description that we'll need to flesh out more, particularly with help from @gwaygenomics:
Cognoma will provide the opportunity to construct a supervised machine learning model th…
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I've made a little guide for Hetionet v1.0. Here is the asciidoc:
``` adoc
== Hetionet in Neo4j
=== Hetionet v1.0
Hetionet is a network of biology, disease, and pharmacology. Knowledge from million…