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Hi,
I am new to data analysis, we have been doing CnT for histone modifications and transcription factor. First I used the following alignment parameters:
`--local --very-sensitive-local --no-un…
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https://doi.org/10.1101/172767 (http://www.biorxiv.org/content/early/2017/08/06/172767)
> Determining the binding locations of regulatory factors, such as transcription factors and histone modifica…
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I think we could improve the display here quite a lot very easily
The red strikeouts seem to be completely redundant with each other
The green strikeouts are curation improvements I will look into w…
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Add the pre-obsoletion do not annotate flag
GO:1904285 regulation of protein-pyridoxal-5-phosphate linkage
GO:1904286 negative regulation of protein-pyridoxal-5-phosphate linkage
GO:00…
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Can use this software in non-human species, e.g. cattle? If yes, how I can build pre-trained model? If human model can be extended to other species?
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As part of the project of removing single step BPs from the ontology (and moving them to MFs as appropriate), the proposal has been made to obsolete
* GO:0009305 protein biotinylation & children:
…
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We often have multiple ways to capture the same information, which makes making annotation rules, and training new curators difficult.
Here is an example that we could discuss and decide what shou…
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Datasets for gene feature boundaries, or ncRNA
Data type/ details | method | PMID | First/last author | data source | status | Comment
-- | -- | -- | -- | -- | -- | --
intron/spliceosom…
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HI tao
I am a freshman in CHIP-seq.I have some problems about macs2.In macs2 readme file,I found that "BAMPE" is a different parameter in macs14 and macs2.Is macs2 strictly distinguished from the dat…
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Initial group info you provided:
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| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…