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For the example in [README.md](https://github.com/YtoTech/latex-on-http/blob/master/README.md#hello-world-get-querystring-api-experimental):
https://latex.ytotech.com/builds/sync?compiler=xelatex&u…
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Could you please clarify how to provide DASH the correct input for the deletion in the flanking regions? The manuscript states:
"We use the b-allele deletion calls from Sequenza and make a flanking …
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Hi,
I have been able to use ConotrlFreec successfully to call somatic CNVs from matched normal/tumor files. However I have been trying to do LOH calls as well and have not been finding success in b…
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_This issue has been moved from [a ticket on Developer Community](https://developercommunity.visualstudio.com/t/debug-dump-analyze-for-gen2loh/1355270)._
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With debug-dump analyze, it's not clear h…
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Prepare HLA and LOH-HLA data for 40k study:
LOH-HLA data:
make script to generate LOH-HLA data
- For patients with multiple normals, keep the one has TRUE in `use_for_patient_level_genotype` colu…
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Hi,
First at all, thank you for this wonderful tool. I have some questions about the files generated by quant function of arcasHLA.
I'm wondering what does significate the results in the quant.l…
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Can I determine which regions are LOH(Loss of Heterozygosity)) based on the results of CNV analysis?
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When trying to compile 3d6ce9622f6d5b6c700b87c02c4f637a2dd9169b using...
* i386 Ventura 13.5.2
* node versions
* v10.14.0
* v10.20.1
* v10.24.1
* v14.21.3
...we get the followin…
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I think I've found an effective way to compress LOH:
If CLR always alloc every large object at the beginning of a RAM page(usually 4KB per page),then the large object heap(LOH) can be compressed with…