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hi
I noticed a strange behavior of MaSurCa for hybrid assembly. I have 10 samples (they are all different for sure), each sequenced using both Illumina and MinION and i made hybrid assembly using M…
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I ran
/path_to_MaSuRCA/bin/masurca -t 32 -i /path_to/pe_R1.fa,/path_to/pe_R2.fa -r /path_to/nanopore.fastq.gz
with seemingly no issues but I can't find "final.genome.scf.fasta"
There is a "primar…
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Dear all,
I am using Masurca for hybrid genome assembly through its conda version.
I ran masurca config.txt and I received the following error (image attached)
![image](https://user-images.gi…
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current link:
https://github.com/alekseyzimin/masurca/releases.Then
fix to:
https://github.com/alekseyzimin/masurca/releases
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This is the full build log → https://ppb.chymera.eu/834be8.log
It also contains numerous warnings and errors of the type `'p1' was not declared in this scope`.
Any idea what's going on and how I…
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Hi,
I am trying to install the development tree of masurca by following the developers instructions:
```
Only for developers: you can clone the development tree, but then there are dependencies…
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I have a question about internal timing of masurca. Does masurca trim adaptors from long read sequencing data set (ONT/PacBio)?
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Thank you for developing great software!
For some reasons, I built 4.1.0 by running install.sh on one workstation.
I then moved the built directory to another workstation and tried to run masurca.…
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Hi,
Sorry to keep posting issues.
I am getting the below error during the end of the 0-overlaptrim-overlap stage.
I tried recompiling but this has not helped.
I am not sure if this is rel…
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I have executed the command ./install.sh, but I got the following error. Anyone knows how can I solve this problem?
----------------------------------------------------------------------
make[3]: …