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### Discussed in https://github.com/SysBioChalmers/Human-GEM/discussions/690
Originally posted by **haowang-bioinfo** August 13, 2023
it's probably good to consider and prepare for accurate an…
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#### Current behavior:
30 genes are discovered to be uncorrelated with their corresponding reactions in `Carnitine shuttle`.
| Gene| UniProtID | Reaction | GPR | Correlation| Manually chec…
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Is there no mitochondrial chromosome or mitochondrial gene annotation in [chm13v2.0.fa.gz](https://s3-us-west-2.amazonaws.com/human-pangenomics/T2T/CHM13/assemblies/analysis_set/chm13v2.0.fa.gz) and […
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### Description of feature
It would be nice to have entry points for different parts of the pipeline ex. snv/sv annotation, mitochondrial analysis.
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Hi,
Now I want to incorporate RNA-seq via PASA when conducting the genomic gene annotation. When I used the FastQC for assessing my Illumina RNA-seq data, I found there were many overrepresented seq…
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THis is mitochondrial termination factor
- [ ] Mterf4 | mitochondrial transcription termination factor 4 | | protein targeting to mitochondrion | | MGI | Mus musculus | IMP | | cgi-12 protein…
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@Antonialock 's first GO-CAM!
The model
http://noctua.geneontology.org/workbench/noctua-visual-pathway-editor/?model_id=gomodel%3A67086be200000363
The genes
https://www.pombase.org/results…
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Hi!
I'm working in the annotation of a red algae which have "transl_table=4" genetic code. Can Transdecoder use this type of genetic code?
I was looking in the manual but I can't find nothing.
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Mam33 is a mitochondrial protein involved in ribosome assembly.
Off-target annotations include:
UniProtKB:O94675 | SPBC776.07 | enables | GO:0003714 transcription corepressor activity | ECO…
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#### Current behavior:
31 genes are discovered to be uncorrelated with their corresponding reactions in `Bile acid biosynthesis`/`Bile acid recycling`
| Gene | UniProtID | Reaction | GPR | C…