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#### Current behavior:
30 genes are discovered to be uncorrelated with their corresponding reactions in `Carnitine shuttle`.
| Gene| UniProtID | Reaction | GPR | Correlation| Manually chec…
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Hi,
Now I want to incorporate RNA-seq via PASA when conducting the genomic gene annotation. When I used the FastQC for assessing my Illumina RNA-seq data, I found there were many overrepresented seq…
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Hello @kimrutherford and @ValWood, first congrats on managing to pass the submission pipeline!
I noticed that the new submission no longer includes the mitochondrial chromosome sequence. I know tha…
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Hello -- just learning and may not know sytack -- but the example
```python
up:Disease_Annotation {
a [ up:Disease_Annotation ] ;
up:sequence [ up:Chain_Annotation up:Modified_Sequence ] ;
…
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### Discussed in https://github.com/SysBioChalmers/Human-GEM/discussions/690
Originally posted by **haowang-bioinfo** August 13, 2023
it's probably good to consider and prepare for accurate an…
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Is there no mitochondrial chromosome or mitochondrial gene annotation in [chm13v2.0.fa.gz](https://s3-us-west-2.amazonaws.com/human-pangenomics/T2T/CHM13/assemblies/analysis_set/chm13v2.0.fa.gz) and […
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### Description of feature
It would be nice to have entry points for different parts of the pipeline ex. snv/sv annotation, mitochondrial analysis.
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THis is mitochondrial termination factor
- [ ] Mterf4 | mitochondrial transcription termination factor 4 | | protein targeting to mitochondrion | | MGI | Mus musculus | IMP | | cgi-12 protein…
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#### Current behavior:
23 genes are discovered to be uncorrelated with their corresponding reactions in `Carnitine shuttle`.
| Gene | UniProtID | Reaction | GPR | Correlation| Manually che…
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### Publication and Data Information
Contact: Aziz Ebrahini at Purdue
Awaiting:
- 12 fasta files of genomes
- 12 sets of genome annotation
- chloroplast and mitochondrial genomes
Not sure whic…