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## Describe the bug
When pressing "Update Watershed" under the Boundary Based Segmentation with Multicut workflow with two channels selected, the following error appears:
## Expected beha…
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## Describe the bug
Right now one has to supply a boundary probability map even if one does not plan to use it for superpixel generation (superpixels generated outside ilastik) and calculating …
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At a messy location that requires multiple splits, it would be great that we have the option to keep the annotations in the neuron of interest from one split to another. So those annotations would not…
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Hi!
I am trying to load superpixels in the multicut workflow. The weird thing is:
* Loading raw + superpixels works
* Loading raw + probabilities works
* Loading raw + probabilities + superpix…
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Tracers reported an issue with segmentation-linked local point annotations that are disappearing after merges and splits, and occasionally reappearing for unknown reasons.
Example link: https://nkem-…
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I am getting the following error when attempting to replicate results in the example folder:
File "/ibex/scratch/bogesdj/miniconda/envs/cluster_env/lib/python3.10/site-packages/cluster_tools/write/…
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Hi,
In Multicut on the training tab, pick a lot of features and then let it compute some prediction. While it is computing, click "Select Features" and change the features. Once you click OK, you m…
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Hi,
I'm trying to run "pixel classification" from the Ilastik plugins after importing an H5 file containing the image set #0 (first time frame) of a set of 2 channel 512x512 time series images. Bu…
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When using the multicut tool, toggling between group selection (a.k.a. "blue team" vs. "red team") requires mouse movement between imagery and layer control panel/ graph tab. Having one group bound to…
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## Describe the bug
When adding an incompatible probability map to an existing raw-dataset, the dataset is still loaded into the gui dataset table after an error message appeared.
## Expected beha…