-
There seem to be some alleles in get_netmhcpan_alleles where the name is the same but written differently, e.g. HLA-A02280 and HLA-A02:280
-
As @christopher-mohr pointed out the mouse allele names for netMHC and netMHCpan seem to be wrong, i.e. should be 'H-2-Db' 'instead of 'H2-Db'.
-
I am getting the following error running mupexi. I appreciate any help in this regard.
AssertionError: Allele "HLA-A02:01" not stated in NetMHCpan output
Command
` /opt/MuPeXI/MuPeXI.py -t -n -…
-
The current [output parser for NetMHCpan4](https://github.com/openvax/mhctools/blob/master/mhctools/parsing.py#L359-L401) is no longer compatible with the output of NetMHCpan-4.1.
Also similar for …
-
Hi,
Does you tool work with mm10 (mouse) data? As far as I know, NetMHCpan-4.0 permitts to work with it, but I did not find this possibility in your documentation.
Thanks
-
Hi,
Aplogies if I am sking something pointless I am fairly inexperienced in coding.
I got this error: no such file or directory "assets"
 I had to elevate the permissions after extracting the sources with the command `chmod -R +rX *`.…