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FRED-2
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Fred2
Python-based framework for computational immunomics
http://fred-2.github.io/
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Use last python2 compatible versions for PyMySQL and biopython
#248
tinyheero
opened
3 years ago
0
EpitopeAssembly fails for instances > 50 peptides
#247
matdoering
opened
3 years ago
0
EpitopeAssemblyWithSpacer with Cbc fails for more than 14 peptides
#246
matdoering
opened
3 years ago
0
Add external ci
#245
lkuchenb
closed
3 years ago
0
Version 2.0.7
#244
christopher-mohr
closed
4 years ago
0
installation issue
#243
Rhonnesss
opened
4 years ago
3
Group peptides by length and check if length is supported in ANN.py
#242
skrakau
closed
4 years ago
1
netMHC mouse allele names wrong
#241
skrakau
opened
4 years ago
1
Fix using mouse alleles and added predictor classes
#240
skrakau
closed
4 years ago
14
Version 2.0.6
#239
christopher-mohr
closed
4 years ago
0
add netmhcpan 4.0 support to External.py
#238
srx3001
closed
4 years ago
0
Fix returned data frame of mhcnuggets predictions
#237
christopher-mohr
closed
4 years ago
0
Problem running predict function
#236
srx3001
closed
4 years ago
13
Updated PCM cleavage scores to match the supplementary material of the paper
#235
e-dorigatti
closed
4 years ago
0
Updated PCM cleavage scores
#234
e-dorigatti
closed
4 years ago
0
Version 2.0.5
#233
christopher-mohr
closed
4 years ago
1
[FIX] ANN Predictor alleles mismatching #231
#232
Zethson
closed
4 years ago
0
[FIX] ANN Predictor alleles mismatching
#231
Zethson
closed
4 years ago
4
Version 2.0.4
#230
b-schubert
closed
5 years ago
0
Bump Version to 2.0.4
#229
b-schubert
closed
5 years ago
0
New release with mhcnuggets etc included?
#228
apeltzer
closed
5 years ago
2
MHCFlurry and MHCNuggets Interfaces
#227
Zethson
closed
5 years ago
6
2to3 converted FRED2 package
#226
apeltzer
opened
5 years ago
10
Python3 Compatibility
#225
apeltzer
opened
5 years ago
1
Support for modern epitope prediction tools
#224
Zethson
closed
5 years ago
2
Potential issue for frameshift tagging in File.IO.FileReader.read_vcf
#223
MartinPersida
opened
5 years ago
3
Change mysql dependency to PyMySQL
#222
b-schubert
closed
5 years ago
0
Change mysql dependency to PyMySQL
#221
christopher-mohr
closed
5 years ago
0
Replace svmlight with something more interoperable
#220
b-schubert
opened
5 years ago
0
[UPDATE] Explicitly listing dependencies
#219
b-schubert
closed
5 years ago
0
[UPDATE] Explicitly listing dependencies
#218
b-schubert
closed
5 years ago
0
[UPDATE] Conda installable
#217
b-schubert
closed
5 years ago
0
[UPDATE] Conda installable
#216
b-schubert
closed
5 years ago
0
dependency problem of svmlight
#215
partrita
closed
5 years ago
1
Conda Package
#214
apeltzer
closed
5 years ago
5
List dependencies explicitly
#213
apeltzer
closed
5 years ago
3
Merge pull request #211 from FRED-2/master
#212
b-schubert
closed
6 years ago
0
Bump Version
#211
b-schubert
closed
6 years ago
0
unexpected hash on Allele
#210
kmhernan
closed
6 years ago
1
[HOTFIX] NetChop fixes
#209
b-schubert
closed
6 years ago
0
[HOTFIX] for NetChop
#208
b-schubert
closed
6 years ago
0
Distance2Self
#207
monikasekelja
closed
7 years ago
3
Connect to a local MySQL Server
#206
adefelicibus
closed
7 years ago
3
[HOTFIX] External Epitope prediction representation bug
#205
b-schubert
closed
7 years ago
0
[HOTFIX] cleanup of all the mess i caused
#204
b-schubert
closed
7 years ago
0
Revert "Revert 200 fix/external prediction representation bug"
#203
b-schubert
closed
7 years ago
0
[HOTFIX] external predictor _representation bug fixed
#202
b-schubert
closed
7 years ago
0
Revert 200 fix/external prediction representation bug
#201
b-schubert
closed
7 years ago
0
[Fix] external prediction representation bug
#200
b-schubert
closed
7 years ago
0
[INTERNAL] switch from gulp to cbc
#199
b-schubert
closed
7 years ago
0
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