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**Describe the problem in content or desired feature**
The meaning of `ER-positive Breast cancer` concept which have the code is Estrogen receptor positive in a Breast cancer while
`HER2-positive…
pxp9 updated
7 months ago
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Hi!
I am trying to execute the meds_etl_omop command to convert my OMOP dataset into MEDS but I'm getting the following error
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Generating metadata from OMOP `concept` table
1it [00:06, 6.49s…
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### Background
Boston Medical Center's Health Equity Explorer (H2E) is a data platform and tool developed on top of existing OMOP CDM infrastructure to allow researchers, clinicians, and other stak…
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A somewhat common pattern in OMOP CDM architectures is to have separate schema's for the vocabulary and the OMOP CDM. We implemented that architecture initially and were unable to access the vocab sch…
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Hi - We're setting up Achilles to run on top of our delta lake through Databricks. I was having issues running the analysis through R, so I generated the SQL scripts and copied them over to Databricks…
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https://ohdsi.github.io/CommonDataModel/drug_dose.html
we used this page as a basis to go about drug dose, but did not get very far because not very accurate / tested.
we have just published a pap…
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I'm getting the following error when I try to run Achilles on duckdb:
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cdmDatabaseSchema
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During an exercise in the CDM WG, we discovered a remnant of an OMOP CDM v6 table in the Atlas Cohort Definition interface. This results in a cohort definition that will not run on OMOP CDM v5.4.
W…