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In case anyone else was still working on the Week 12 assignment and running into issues with the code, I believe the code is depreciated for the current version of the hierfstat package. This is how I…
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Line 95 states that after simple_random_assignment_step(voter_file), as well as Z, the data includes Z_cond. Where is this? I can only see Z.
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For VRPTW, routes are directed so the current `brokenPairsDistance` implementation compares directed routes (through directed neighbours).
* For CVRP, we should probably implement a a version that co…
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Might be an easy fix. Here's an example of failing code (modified from the existing mfpt tests).
```
import numpy as np
from msmbuilder import tpt
from msmbuilder.msm import MarkovStateModel
…
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**Description**: Update the repository with detailed conversion rules to prevent loss of information.
**Tasks**:
- Document the rules for county, barony, duchy, kingdom, and empire generation.
- Incl…
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Hello,
I am using poppunk 2.7.0 with pp-sketchlib v2.1.4.
I am having issues when running fit model:
poppunk --fit-model dbscan --ref-db TBdb --output TBdb_hdbscan
Output:
PopPUNK (POPu…
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I make significant use of Julia's Distributed functionality in my [SymbolicRegression.jl](https://github.com/MilesCranmer/SymbolicRegression.jl) package. It uses asynchronous computing for a genetic a…
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Update notation for the assignment of populations to quantiles of the beta distribution so that it is explicit in the equations rather than just described in the text. This should be changed in `demog…
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Hello Dr. @markkukuismin,
This is not an issue but a question about BONE.
As indicated by the title, I was curious if/how BONE might handle admixture. I am working on trying to conduct mixed sto…
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Hi,
Thanks for your useful method to infer parent-of-origin. I have two questions:
1. How to use the output file of _Step 3 Groups assignments_ **xIBD.txt**? It seems that you do not use it in th…