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Hi! I am having a problem annotating a VCF file of structural variants. I just want to add tags to the INFO field by ID but I get this error:
```
bcftools annotate -a ${ANNOT_FILE}.gz -h ${HDR_FIL…
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Hi,
I encountered this issue that seemed to be triggered by something to do with repeatmasker:
########################################################################
RepeatMasker version 4.1.2-…
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### Description of feature
GitHub: https://github.com/CSU-KangHu/HiTE
- Visibility, @yykaya
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您好，我想求助一下，我在开始运行之后，出现了以下报错，这是什么原因呢，请问这样怎么解决呀？
No such file or directory at ~/geta-master/bin/merge_repeatMasker_out.pl line 40.
failed to execute: ~/geta-master/bin/merge_repeatMasker_out.pl ~/cevi.…
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Hi,
Since there are significant updates in the new version, could you please create the package for RepeatMasker 4.1.6?
Thank you in advance
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Hi:
When I run TEmarker_bed.py, it showd :
"Cannot find repeatmasker executable, please check if it has been installed."
But it seems repeatmasker didn't use in the manual.pdf. Is this righ…
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Hi Team,
I noticed that there is a huge differences between rmsk.bigBed and GCF_009914755.1_T2T-CHM13v2.0_rm.out as shown below:
5,586,304 rmsk.bed (converted from rmsk.bigBed using bigBedTob…
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Hi,
I used GraffiTE to find pMEs across three genomes, and it worked smoothly. Recently, I started to include more input data (11 genome assemblies and a reference genome), and consequently, I alloc…
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There is error when go through step using RepeatMasker:
"Species 'human' is not known to RepeatMasker."
It looks like I didn't setup the reference database RepBase for RepeatMasker properly.
Ther…
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