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Hi!
I just wanted to check a few things and get some suggestions on how we do CNV analyses. Currently, we are using CNVKit from SevenBridges. I hope that I can get some better understanding of the …
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I am new to Rabix and CWL in general. I am just trying to understand how to run my tools from the Rabix Composer on Windows 10. However, everytime I go to test a tool or workflow it gives me the follo…
ghost updated
3 years ago
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### What would you like to see added?
Issue for info on large file transfers and using `sciencedmz` partition.
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The instructions explain that various lines of a shell script need to be changed. Wouldn't it be more sensible for the user to pass arguments to the script at the command line instead of editing the s…
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SPLIT UP INTO TIX BY PLATFORM** [~accountid:5ad7afeb1db05e2a66fa947b]
## Feature Request
The Launch with buttons for FireCloud, DNAstack, and DNAnexus only appear on the Workflow page.
If feasible…
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**Is your feature request related to a problem? Please describe.**
While looking at #3616, it came up that we don't support CWL written using JSON. CWL documentation says it can be written with yaml o…
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Per [FDS-1416 ](https://sagebionetworks.jira.com/browse/FDS-1416) we were getting a DCA crash due to an invalid regex for the attribute `Filename`.
Investigation revealed that the baskslash escape …
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Hi,
I was looking to install this to run on my sample collection. Is this still the primary location for the software? It doesn't look like it's been touched in a couple of years.
Do you per…
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I have a toy example that requires an exclusive parameter and a regular parameter and it seems to run fine when I try `cwl-runner` (see copied below). I would like to adapt a tool in Rabix to use the …
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ERROR Tool definition failed validation:
The CWL reference runner no longer supports pre CWL v1.0 documents. Supported versions are:
v1.0
v1.1
v1.1.0-dev1 (with --enable-dev flag only)
v1.2
v1.…