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Hi,
I have a single cell multiomics (RNA + ATAC seq) dataset, and have used another programme (ArchR) to generate pseudotime trajectories. I have 2 trajectories of interest - for each I have a matr…
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Hello,
I would like to know how MultiVI associates ATACseq peaks to genes. Does it associate it to TSS up/down some specific distance, or does it associate it to to the full gene including intr…
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**Describe the bug**
Hi!
I am Sergio Aguilar and I am currently trying to use the pipeline explained here https://scenicplus.readthedocs.io/en/latest/pbmc_multiome_tutorial.html. For this (as test…
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https://mp.weixin.qq.com/s/uyMcThYI7uq9TV1uBLktAw
ixxmu updated
3 months ago
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Hello there!
I am analysing BD Rhapsody Single cell data and am wondering how to proceed with Salmon Alevin. After alignment I expected to create a Seurat Object with information of sample tags obt…
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**Submitting author:** @falexwolf (F. Alexander Wolf)
**Repository:** https://github.com/scverse/anndata
**Branch with paper.md** (empty if default branch): paper
**Version:** 0.10.9
**Editor:** @luiz…
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New projects (15):
1. [A Single-Cell Transcriptome Atlas of the Human Pancreas.](https://data.humancellatlas.org/explore/projects/894ae6ac-5b48-41a8-a72f-315a9b60a62e)
1. [Identification of neural o…
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## Motivation
Data imported from Crossref can include duplicate authors for a paper. This is confusing to our data consumers, so duplicate authors should be removed from our collections.
Reported by …
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## Preferred term label
BD Rhapsody Whole Transcriptome Analysis
## Synonyms
BD Rhapsody WTA
## Textual definition
BD Biosciences-based technology that sequences mRNA from the 3' end in…
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https://mp.weixin.qq.com/s/IVb7sTigJCZcOKSFsvBB5Q
ixxmu updated
6 months ago