-
Hi! Could you please tell me which file is needed when I prepare the input file.
And when I write that "prefix='/usr/ROMSPath-master/lk/mm20_avg2012advC62_" in the term of romsoutput in the file ROM…
-
Hi,
I followed the tutorial in: http://soft-matter.github.io/trackpy/v0.5.0/tutorial/walkthrough.html
I would like to use the velocity prediction function predict.NearestVelocityPredict() used h…
-
Figured it might be a good idea to keep track of the different hyper-parameter combinations/ strategies we've tried while troubleshooting the issue of the PSO getting stuck in a local optima.
Basel…
-
Hi there,
I am running Mosaic Particle Tracker for 2D spots location of GFP and RFP tags in fluorescence microscopy images. I realised that previous to estimation of point locations and its refinem…
-
At present, LIGHT fails if there are no particles on a computational domain.
cc @bradyrx
-
In a variation on ex01a that Joe generated using FloPy, he reported a problem with mass balance errors and backward-tracked particles not terminating properly at a recharge boundary. We determined th…
-
Dear developers,
I used subset to select some particles at the beginning, and when I checked the ID of particles at different times, I found that some particles with some certain ID suddenly disappea…
-
As pointed out by @MaxThevenet and @soerenjalas, it is often useful to call openPMD-viewer methods for each timestep of a timeseries, and it would be nice to have an API that does this automatically. …
-
How do read the positions of the trajectories?
I can read the files in the folder with:
import h5py
f1 = h5py.File('jhu_t4_n150')
import numpy as np
data = np.load('trajectories.npz')
D…
-
Sorry if this is the wrong place, but I didn't know how else to contact you or approach the topic.
The functionality of this project looks really powerful and I was eager to use it for analysis of m…