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```
~/github/MOSAIK/demo$ ./Align.sh
------------------------------------------------------------------------------
MosaikAligner 2.2.30 2014-06-27
Wan-…
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Divide that thing !
The water method really made me laugh !! Why would you name it like that doesn't make sense
You really suck at programming dude im sorry
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Hi Jayne,
I am trying to use mobster to run my wgs sample to call MEIs, but I got the error when Mobster call MosaikAligner to run the alignment. Do you have any thoughts about this error?
Thank…
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See https://github.com/maxbachmann/rapidfuzz/issues/13 for generous details from another fuzzywuzzy compatible project author.
Essentially, `partial_ratio` attempts to align strings optimally, then…
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### Expected behavior
For every candidate pair passed to the GPU implementation of GACT, reads should be either
1. filtered out after the first tile due to bad scores, or
2. aligned fully
### Ob…
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## Platform
- SeqAn version:
- Operating system:
- Compiler:
## Question
In earlier versions of SeqAn there was a function called localAlignmentScore (https://docs.seqan.de/seqan/m…
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## Requested feature
@stefan-mueller and I were wondering whether we should introduce edit distance based measures of text similarity to quanteda.
Stefan shared with me a paper by James P. Cros…
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Thanks for developing MOSAIK, I tried on a human dataset and get a Segmentation fault. Any hints?
Thank you!
## /home/snow/bin/MOSAIK/bin/MosaikAligner -in LID115260_MERGE1.mkb -out ../bamfiles/LID1…
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```
What steps will reproduce the problem?
1. I'm trying to align Solid PE 50/35bp to hg19 masked with snp132
2.
3.
What is the expected output? What do you see instead?
----------------------------…
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```python
log_probs (torch.FloatTensor): Input tensor with shape (N, T, U, V)
where N is the minibatch size, T is the maximum number of
input frames, U is the maximu…