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Some terms such as 'mislocalized cement gland' (XPO:0103842) have 2 labels. The additional labels should be made into exact synonyms. The longer 'abnormally localised [XAO]' labels should be the ones …
seger updated
3 years ago
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Update with new XAO ontology available in go-lego.
https://github.com/geneontology/go-ontology/issues/19259#event-3232012671
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We at Xenbase would like to have the Xenopus Anatomy Ontology (XAO) incorporated into the 'go-lego.owl' for use in Noctua. I assume this will require a similar reconciliation process to the one the Z…
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The link provided at http://www.obofoundry.org/ontology/xao.html is not going to the ontology. Please note - a new version of the XAO was released 13 Jan 2017 and can be found at the same location as …
seger updated
7 years ago
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The most recent XAO release was made on 27 May 2015. The ontology source shown in OntoBee is defunct. The repository is now located here: https://github.com/xenopus-anatomy/xao
seger updated
9 years ago
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Hello,
The definition of tailbud stage is not consistent with the ontology. Should be...'from Nieuwkoop and Faber stage 22 to stage 44 ' ...instead 'from Nieuwkoop and Faber stage 20 to stage 44 '...…
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XAO has 'mouth primordium',
```
def: "Anterior part of the embryonic alimentary canal that is formed as an invagination of the ectoderm and is the future mouth." [UBERON:0000930]
```
yet mouth does…
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Is the part_of relation here correct? Is a polar body both a cell and part of a cell?
```
[Term]
id: XAO:0000262
name: polar body
namespace: xenopus_anatomy
def: "A small cell formed by the meiotic d…
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In the section of the amphibia aortic arches, Kardong says:
"In amphibians, the first 2 aortic arches disappear early in development"
...
"the section of ventral aorta between arches III and IV becom…
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XAO:1000003 blastula stage (NF 7-9)
should have the relation:
relationship: preceded_by XAO:1000004 cleavage stage (NF 2-6.5)
Reported by: anneniknejad
Original Ticket: [obo/xenopus-anatomy-xao-ter…