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When I try test2d.py, the error occured:
`python3 test2d.py --task fundus --split all --ds valid2 --net segtran --bb resnet101 --translayers 3 --layercompress 1,1,2,2 --cpdir ../model/segtran-fundus-…
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Hi;
I need to calculate the model accuracy (example dice loss). Hence, I need the model predication and grounds truth.
What is the model predication out of those? : **sample, x_noisy, org, cal, ca…
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Getting FileNotFoundError for '/content/drive/My Drive/Colab Notebooks/BRATS/HGG' in dataset.ipynb file, there are some files missing in the directory, I don't know where to download them.
![image](h…
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Dear author, hello, I would like to ask when will your code be published on github?And I would like to ask if your code is suitable for 2d data?or is there a version of the code for 2d datasets?Sincer…
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I noticed that choosing the training labeled samples for semi-supervised learning can greatly affect the final experimental results. Could you please tell me how you selected the labeled training data…
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after running the following command
nnUNet_evaluate_folder -ref GT_BRATS2020 -pred predTs_BRATS2020 -l 1 2 3 4
I found the results like this. could anyone please help me in this regards?
{
…
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**Describe the bug**
I want to use Slicer to visualize some MRI images and use auto segmentation on the MONAILabel server. My server is running on a GCP VM, which is set up successfully and can conne…
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Hello, Im feeding the network data with size of [1,128,128,128] but I keep getting the following error: "RuntimeError: Given normalized_shape=[48], expected input with shape [*, 48], but got input of …
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作者您好,对于论文中所展示的医学图像合成的实验的数据处理,论文中好像并没有仔细阐述,brats2020训练集包含369名病人的数据,测试集包含125名病人的数据。代码里所展示的貌似是对每一个.nii文件取一张切片,即第79张,请问我理解的对吗?369张切片用来训练是不是太少了?如果有哪里遗漏还希望您能指导一下。
感恩的心♥
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whats mask in this dataset? can u explain more?