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I wanted to create [decoupled dynamic pipelines](https://forums.developer.nvidia.com/t/designing-dynamic-decoupled-pipelines/147783) and gst-interpipe has helped me achieve this.
My application has 2…
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Follow up to https://github.com/elastic/kibana/issues/197420
Meta issue to summarize improvements to test coverage for 8.18.0.
## Jest unit tests
- [ ] https://github.com/elastic/kibana/pull/200977 …
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### Description of the bug
I have been able to successfully run the pipeline test
nextflow run nf-core/differentialabundance \
--outdir test \
-profile test,docker
Unfortunately, I remain u…
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Dear Greg - thanks for your continued work on this and for this follow up paper with updated pipeline. I'm the lead author of [Hermida et al. Nat Commun 2022](https://www.nature.com/articles/s41467-02…
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Emma's data:
https://gannet.fish.washington.edu/emma.strand/rnaseq/Cgigas_ArredondoEspinoza2023/salmon.merged.transcript_counts.tsv
https://gannet.fish.washington.edu/emma.strand/rnaseq/Cgigas_A…
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Dear Nanoporetech,
I am having an issue running this. I have altered the config.yaml (pasted below). I read an another issue that full paths were required so I added these, but have removed identi…
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## Objective
Demonstrate the value of the AutoEmulate software package by showcasing its cross-disciplinary applicability through a series of domain-specific tutorials. These tutorials will highlight…
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Hello,
thank you for this excellent tool. I want to use it as part of a surface-to-surface registration pipeline for biological image analysis (by mapping each surface to a disk or sphere). Could y…
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### Description of feature
**Description**:
I am writing to request the addition of parameters for specifying haploid contigs and regions when detecting SNPs and Indels using DeepVariant in the nf…
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As a user of the DCP sc transcriptomics data, I'd like to be able to obtain tertiary analysis results on DCP data.
As a user of the DCP, I'd like for releases of HCA data to contain tertiary analysis…