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Hello,
I really like your tool but I was wondering why my jobs won't run to completion. It always stops at Performing weighted average proximity (WAP) hotspot enrichments... Is it possible you can …
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Hi again,
I have another question, is there a way to retain the reads that map to each reference taxon? I have looked at the various options for output-type and do not see the option to output the …
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Hi @jlevy44 , I ran polycracker test_pipeline with my genome (with same name algae.fa) in test_data/test_fasta_files folder. It executed all the sub-program but after that show following error:
```…
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Dear Seurat team,
Recently, our team has encountered significant reproducibility challenges while using Seurat. When applying the same code to identical datasets on different devices, we observe su…
jmgs7 updated
4 months ago
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Note: this is my open planning doc for this project. Any feedback/suggestions welcome!
cc @freeman-lab @mckinsel @olgabot
# Overall goals
Use tabula muris data and experiences to help understand …
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I'm interested in particular GO terms in my input files, but they do not get included in the "main data table" (GO division)_(input filename). I understand that all original GO terms aren't actually a…
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**Snakemake version**
5.10.0
**Describe the bug**
Calling a subworkflow `sub` with a target that is not a file, but rather a pseudo-target, the target rule first runs successfully, but then S…
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Hi,
I am trying to use PlantClusterFinder. I am working on plant genome and wanted to use this tool to search gene clusters of my interest.
Therefore, I downloaded the lattest release of Plant…
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> parse
@mhemberg
Hai did you get restults by running these comments
"singularity exec docker://dfam/tetools:latest BuildDatabase -name sequence_index -engine ncbi sequence.fa…
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Here are some things that I'd love to see in GraphAligner:
- Non-GAM textual output (GAF?) to simplify downstream processing of alignments
- Independent aligner library (to embed in other tools)
…