-
This might be more appropriate to post in the ‘computers’ repository, but on rosenberg, i’m trying to commit some code but i am getting this:
~~~
(base) p101317@rosenberg:~/code/ivadomed$ git comm…
-
Based on a discussion with @jcohenadad and @mchen1110, I added the `lesion-manual3.nii.gz` segmentation to the git-annex `basel-mp2rage/derivatives`. My branch is named `jv/add_lesion-manual3_to_deriv…
-
As suggested by @perone in issue #97.
-
When training a new model (e.g., see [training_guideline.ipynb](https://github.com/neuropoly/axondeepseg/blob/master/notebooks/training_guideline.ipynb)), the dimension of the working pixel size is ne…
-
## Issue description
### Current behavior
When run on a machine with GPUs, some tests fail with
```
Traceback (most recent call last):
File "/home/GRAMES.POLYMTL.CA/p115628/.conda/e…
kousu updated
2 years ago
-
### Description
If an env named `venv_sct` predates running `./install_sct`, the installation will fail.
### Steps to Reproduce
1. Install miniconda from https://github.com/conda-forge/minifo…
-
Hi,
So I am training a segmentation model of axon and myelin from microscopy images using axondeepseg. The whole process up to creating the trained model worked just fine. However when I am trying …
-
**Describe the problem**
Current issues with hosting data on OSF:
- OSF is cumbersome to use (too many clicks, specific APIs that the team needs to learn to use),
- not compatible with git
- li…
-
I would like to know how to use my trained model to segment data. I have trained ADS to my liking and I want to know how to use that to segment the batch of images I have. Does it do it automatically …
Paasu updated
2 years ago
-
### Context
Researchers from University of Basel shared MP2RAGE data from 30 subjects with MS. Data include manual segmentation of MS lesions.
Data are under: `data.neuro.polymtl.ca:basel-mp2rag…