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Hi,
I am getting the following error when I test the Cancer tumor normal example. I think there are two main errors
1> "Aligning lane 1_2014-08-13_dream-syn3 with bwa aligner cat: write error: Br…
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are under
GO:0043566 structure-specific DNA binding
Interacting selectively and non-covalently with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding.
So I cou…
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Hello,
I just tried to get RNAlien working with the first benchmark file (RF00001) with the following output:
```
RNAlien -i input.fa -o ~/RNAlien/1/0/ -d testoutput
2 sequences; length of ali…
riasc updated
7 years ago
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1) Save displays / coordinates (either as file or via cookie)
When I was working with a large and complex structure, a few hairpins were slightly overlapping. It's not a big deal, because it's really …
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Hi to all,
I noticed that if a try to parse with SeqIO.parse this genbank_record, it misses some features (in particulart tRNA).
The record is X93575.1.
This is the typical output:
handle = open(gb…
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Add taxon constraints for cases where the taxonomic group is cited in the term name e.g. bacterial degradosome, plant-type vacuole, nematode larval development.
Reported by: jl242
Original Ticket: […
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What are miRNAs?
What are two methods to identify miRNAs in sequence data?
sr320 updated
7 years ago
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There are three eukaryotic exosomes, the cytoplasmic, nuclear and nucleolar exosomes.
GO currently has the following terms:
GO:0000178 exosome (RNase complex)
Def: Complex of 3'-5' exoribonucleases.…
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Hi @cmungall
Stemming from https://github.com/geneontology/go-ontology/issues/12814
There were 2 terms in the ontology with identical definitions (likely a results of copy-paste):
[Term]
id: …
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Hi everyone, I filled in the sub-section in the introduction titled "Types of biological problems". I briefly describe the three classes of topics (categorize, study, treat) and discuss the typical q…