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See this comment as an example:
https://github.com/monarch-initiative/mondo/pull/2268#issue-517185148
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The condition listed in MONDO: Weiss-Kruszka Syndrome MONDO:0032836 has exact match
https://omim.org/entry/618619 with dbxref OMIM:618619. It is not currently tagged as rare in MONDO but it is a ra…
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@larrybabb, @cbizon, @ahwagner please review proposed terms to add to GENO to support ClinVar allele origin terms: https://github.com/monarch-initiative/GENO-ontology/issues/43#issuecomment-61111592…
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The following axioms should be created/updated from OMIM:
'has material basis in germline mutation in' some GENE
- gene-to-disease information from OMIM, based on rules discussed HERE (need to be…
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We still don't have functioning links for Orphanet curies, we need to make sure that it's added to `merged` or `merged.monarch` in prefixmaps. This should be a very quick change!
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Are there established methods / approaches to capturing and tacking mapping / implementation decisions or approaches, particularly in implementing OMOP?
Melissa Haendel mentioned https://github.com…
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It would be nice to have a test mode/development mode available to be able to run the pipeline from end to end with a small set of phenotypes, say 10 or 100 phenotypes per species, just to facilitate …
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Hi @mattldawson,
Let me put in context: This error can be easily view through the branch `chem_mod_testcb05_monarch `. This branch adds different photo_rates to test_cb05 (extracted from a monarch…
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Copy of: https://github.com/monarch-initiative/mondo/issues/2629
(This may already be complete)
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## Overview
In #158, `review.tsv` was added to the list of artefacts. We should utilize it.
Copy/paste: review.tsv in README 2024/11/07
## Release files
...
- `review.tsv`: Special cases to c…