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Hello, I want to segment the liver and tumor labels in LITS at the same time. Can they be used directly? Or need to modify the number of channels in the code?
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Per discussion in the prioritization doc:
Licenses we have retrieved at this moment …
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Unet is the basic network, and the others are improved versions of unet, but why is the dice coefficient of segmenting liver tumors lower than that of unet?
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https://mp.weixin.qq.com/s/T_vehoe8WncnU3X1Q2MKFA
ixxmu updated
2 years ago
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Run Segmentation for model: segmentation_ct_liver_and_tumor - Status: 404; Response: b'\n404 Not Found\nNot Found\nThe requested URL was not found on the server. If you entered the URL manually please…
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Hi, ziyi
Can I apply TOAST to esitmate immune cell fractions of WGBS data from liver tumor tissues?
If so, how should I prepare the input data?
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https://mp.weixin.qq.com/s/-MpXbM05cmzEcras4W-DMA
ixxmu updated
2 years ago
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@tosfos I'd like to filter signatures exported from BugSigDB by review status for #80.
This seems currently not possible as the only column that we have in the export csv files on review status is `R…
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**Is your feature request related to a problem? Please describe.**
MONAILabel V1 only supports single-label segmentation.
In our case, we need to be able to segment multiple structures at once.
…
che85 updated
3 years ago
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Some stuff that jumped out at me while I was looking at parts:
```
specimen in sections (slide)
specimen subsample (70% ethanol)
specimen subsample (95% ethanol)
specimen subsample (froze…