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Hey @BPerezLamarque
Thank you for an amazing paper and tutorial for running the "HOME_model".
I am getting an error where the OTU tree tips need to match the host tree, but they need to be unqiue…
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Hello,
Getting around to finally playing this cool method you've developed!
Just a minor suggestion that maybe `lty` parameter should have some defaults if the user doesn't provide them. Currently…
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Hi Fernando,
I installed `cami-opal` with `conda` and got some error caused by `bokeh`.
log
```
2021-04-06 10:48:04,833 INFO Loading profiles...
2021-04-06 10:48:04,835 INFO done
2021-04…
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Hello,
When attempting to generate alpha rarefaction curves, I notice that when selecting 'Artifact tree, if exists' as the phylogenetic tree option, but using a metric that does not require a tree…
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The other goal that can be started is the experimentation of a get_profile function or similar in fileutils that would slurp the entire profile into memory. I'm sick of not being able to have direct a…
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Hello,
When attempting to generate alpha rarefaction curves, I notice that when designating 'Number of observed features, including singles and doubles' the following error is generated:
Error r…
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Basically if you open a rarefaction plot and wait for a few seconds and/or start interacting with the zoom; the plot frame gets cut in half, like this:
![rarefaction](https://user-images.githubuserco…
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Hello IUC,
**Tl;DR:**
Help us fix tool tests!
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we would like to make sure that our tools are well tested and working in the widest range of deployment scenarios possible…
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@caroliver is working on a testing suite for the package https://github.com/caroliver/mobr/tree/auto_testing .
One of the most important tests we need is for the function `rarefaction`. This paper…
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next steps: pick the best two examples for the comparing to the null distribution
treat nutrients as species, and species as communities of nutrients, so to get a different FDiv value for each specie…