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Hi，
Thank you for developing this software. I ran `wc -l jobfile.txt` and the output is `20876 jobfile.txt`. I try to edit sbatch_blat.sh `#SBATCH -a 1-20876` , but there is an error `sbatch: error: …
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Hello,
I am trying to use MCL to do paralog clustering of 13 genomes for comparative genomics. I have been using the protocol "Using MCL to Extract Clusters from Networks" as a reference for doing …
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Hi
I'm getting a schedule deadlock error with my guide tree when I run cactus-prepare.
My guide tree input file looks like this:
```
((HOR21599_pseudomolecule_v1:0.00475,B1K-04-12_pseudomole…
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Hi David,
I'm trying to use the Orthofinder.2.3.12 conda version, with -ft option (the exact steps are detailed below).
The Orthofinder run completed after ~1min with no error messages, and the st…
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Hi Guys,
i get following error , i run amazon EC2 instance:
kind-PreprocessSequence/instanceZHyqbp Unable to find image 'quay.io/comparative-genomics-toolkit/cactus:a542b9c4ca10af2c73803335bbb…
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I tried to parse .bib files exported from scopus today but ended up with a total mess of column names (see below).
``` r
bib_string No coercion to numeric applied.
#> # A tibble: …
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A user reported mismatch of information presented in the tutorial for the Comparative Workflow after updating to the v2020.01 version.
> Hi Cory,
> I was trying to do phage comparative genomics u…
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Is display order tied to the order on the config page?
Can we get the track hub to fit after Mapping and Sequencing and Genes and Gene Predictions?
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Hi,
Thanks for the great tool!
I assume that for integration with the UCSC genomes browser that the `global_assignments.pb` and/or `global_samples.vcf` files are regularly updated. Is it possibl…
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I guess there's no Docker image on quay associated with this commit:
```
Error response from daemon: manifest for quay.io/comparative-genomics-toolkit/cactus:a542b9c4ca10af2c73803335bbbf7ccb8457e…