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The following function runs fine in interactive mode but fails on LSF, for the reason that x is not defined in a new environment.
```
> library(BatchJobs)
> x = 5
> f = function(y) x+y
> reg = batchM…
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This was requested at the Bioconductor Developer Meeting.
Without `staged.queries` -> permanent database lock.
With `staged.queries` -> overburdened file system server (not sure if chunked nicely)
S…
mllg updated
10 years ago
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I wanted to create a mlr task from a data set that I just uploaded to OpenML. Unfortunately, there seems to be a problem with some characters in the data set's description!?
Do I have to change the d…
ghost updated
10 years ago
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Checked by Bernd:
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Actually, what happens is well defined but probably really useless of one considers that the vector of ids gets shuffled?
Is there any use case where a user would like to set inds with chunking?
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Hi,
I have tried to install the devel as well as the release version and failed on both counts.
![ballgowninstallation](https://cloud.githubusercontent.com/assets/8257635/3688882/d27f115a-133a-11e4…
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Hi
I try to add a .mzid file to my MSexp object but when I look at fData I only see NA's. There are for sure identification in the file (it's 50 mb and when I open it in an editor I see lots of entri…
adder updated
9 years ago
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BatchJobs execution gets halted before it can queue the jobs.
> options(BatchJobs.on.slave=TRUE, BatchJobs.resources.path='/import/scratch/user/dpuru/BatchJobs-scratch/bmq_7fbd23130dcd/resources/reso…
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Using the package here at the LMU HPC (SLURM) cluster I found out two things
a) The package basically works out of the box
b) Listing jobs does not work. The problem is trivial.
Instead of what we …
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At the moment, when working in BatchJobs mode, the working directory for the spawned Batch Jobs is set to the defined storageDir?
My code just crashed because of this behavour - the relative paths in…