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* The PMCID and DOI (when they are listed)
* Journal information (including the ISSN, title, and abbreviation)
* The publication month
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Hi All,
Recently, I was implementing a PDF file parser and as part of the development I needed support for various data decoding filters while reading the data using `BufferedInputStream`. For exam…
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I am using ArrayViews to loop over a big array and operate on little slices of it. It works extremely well and is very convenient, but I noticed that if I am extracting a row vector from a high dimen…
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New BAM files can support more than 65535 cigar opcodes
https://github.com/samtools/hts-specs/issues/40
> There was discussion on the samtools-dev mailing list about this last year: http://sourcef…
ghuls updated
6 years ago
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On Julia v0.6, I try `Pkg.add("GenomicFeatures")`, and get the following error:
```
ERROR: resolve is unable to satisfy package requirements.
The problem was detected when trying to find a feas…
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```julia
pkg> add PackageCompiler
┌ Info: Pkg3 is still under development, please file issues at `https://github.com/JuliaLang/Pkg3.jl`.
└ Pkg3 is running without precompile statements, first actio…
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I think there is a syntax discrepancy between either Julia versions or Bio.jl versions and I can't figure out which is correct
tried following example on https://github.com/BioJulia/Bio.jl/blob/mas…
rgate updated
6 years ago
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Running the FASTA reader seems to cause some allocations, despite preallocating a record. The following minimal example represents the issue. The FASTA file used below comes from [JuliaPerlBenchmark…
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Parquet.jl is currently broken with Julia 0.6
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Now that BioJulia is progressing, we should use it to create phylogenetic and genetic diversity measures.