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Thanks for implementing TAMPA. I installed the tool with conda:
```
conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge
conda create …
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**Environment**
* pip version: 19.2.3
* Python version: 3.6
* OS:
**Description**
When I install my python package using pip it removes everything from site-packages. This happened off a…
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```
docker-compose -f docker-compose-build.yml build base dev
ERROR: Package 'bpaingest' requires a different Python: 3.7.12 not in '=3.8.1'
```
Tried with Python 3.8:
```console
[hou098@terri…
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Dear,
I am trying to simulate what analysing a shorter amplicon (V3V4 444bps) from Sequel IIe HiFi reads would give.
All files are replicates of the Zymo mock community V1V9 full length amplicon.
…
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Hi there, I've been trying to run Camisim with NanoSim to simulate ONT reads. I've tested the program with the art simulator and works but I can't figure out how to run it with NanoSim. The error I'm …
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@shiltemann kickstarted these tools already in https://github.com/galaxyproject/tools-iuc/pull/1044
A few tools are missing and I think this is a very good task for a beginner that wants to learn G…
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Hi, I am working on microbiota analysis for sequence obtained from shoreline biome kit. I have obtained ASV .tax file, .biom feature table and ASV .fasta file from DADA2 pipeline following the analysi…
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Hello,
I am trying to run ancombc2 and I am running into this error when the tax_level is kept as NULL, or specified as Genus, or any tax level with repeated tax names as "uncultured".
The comm…
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Hi,
I am trying to install using mamba and run this software but I am having some trouble with the phlyloseq package and R. The packages seem to be present but I get an error.
[13:14:24] Input d…
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When using the import_biom and sample_data functions is it possible to merge these to with the merge_phyloseq function?
I have some problems getting my metadata and phylogenetic data into the same d…