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Does any have a script/know how to convert a large number of 23andMe files to a VCF format and then merge those files?
I'm trying to prepare a large amount of data to send to the Sanger Institute …
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We will have a Makefile for building new docker images for running convert23andMe on 23andMe data files.
Instead of having that Makefile pulling data from the 1k Genomes project each time, we shoul…
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The chunking code for 23andMe data is still using chunks that are too large for the default MySQL settings.
I'll go in and change the chunk size myself.
@SAgrawal14 @visheshd
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Checking if a yaml file contains the required information should probably be done by creating a yaml schema file.
The checks could then be perfomed using for example this library:
https://github.c…
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An activity's page gives the information that `You can withdraw and deauthorize this project at any time to immediately revoke all granted permissions. Click here to withdraw/deauthorize this project.…
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https://opensnp.org/genotypes/new
Says that:
```
Provide your genotyping file
*Zipped genotypings are fine too.*
```
It would be useful to know if you truly mean `ZIP` standard or can also handl…
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Change effective date on terms of service to November 30, 2015
Update terms of service "Site" with "We Are Curious" name.
Any mention of 23andMe should be written that way, not 23&Me
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Was testing with SNPedia sample file and came across error. _Raise TypeError(repr(o) + " is not JSON serializable")_. Rendering rsidDict partially incomplete.
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**[ Project Contact ]** @philippbayer & @gedankenstuecke
**[ GitHub Repo ]** https://github.com/opensnp/snpr
**[ Track ]** Open Innovation
**[ Community ]** Mozilla Science - wrangler @stephw…
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Compete Genomics (now defunct) was a common whole genome sequencer, which provided `tsv` files in two formats:
`236M masterVarBeta-ASM.tsv.bz2`
`239M var-ASM.tsv.bz2`
This was also the provid…