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`result_objs` are pretty complicated. Max has (rightfully) complained about this, so I'm looking for options to simplify.
A big part of the complexity is due to the fact that the fields returned de…
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**NOTE: The goal of this is to find something resembling community consensus on a direction, or at least a notable lean in one direction or another from a large swath of the community.**
We are **n…
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Hi Maarten,
I came up with an error that may be related to the use of ICA-AROMA. ICA-AROMA worked well with most of the subjects. However, three participants couldn't finish the preprocessing.
I che…
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Hello:
This is not really an 'issue'. More just a lazy nub asking to handholding.
We want to test out mafviewer before launching into a website, etc.
But we have not been able to get the plu…
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#### Description
Plain text corpuses are sometimes represented using a directory structure with, for instance a top-level directory and subdirectories that represent categories. Then within each subd…
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### Description
What I have not recognized so far is that ``pickle`` objects are just a string representation of the python object and get extremely big extremely fast.
For example, the combined…
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Evidently, [nbconvert](http://nbconvert.readthedocs.io) is unidirectional going _from_ the `ipynb` format to a host of other formats. It does not handle conversion _to_ `ipynb` from these other source…
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#### TODOS (again):
- [x] re-branch (client-side port?), jbrowse and Apollo
- [x] finish porting MultisequenceProjection to shared
- [x] remove back-end projection sequences
- [x] pull scaffold sequen…
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# What
Using --prepipe to specify a preprocessing command is vulnerable to shell injection.
# Proof of concept
```
[cym13@Eather test]$ ls
[cym13@Eather test]$ mlr --from a\;uname\ -a\;.csv --prepip…
cym13 updated
8 years ago
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Update from Dimitri, Oct 2012: after talking with many developers and users, we should definitely make the inversion tools in SPECFEM3D more standard and more user friendly. Even if there are many opt…