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### Description of the bug
Hi,
I want to ask why I use latesest version, but my results is still macs2, not macs3.
Here is my command line:
```
nextflow run nf-core/atacseq -resume -c nextflow.conf…
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Hi! Thanks for your work.
Is TrEMOLO suitable for application to the human genome?
I'm tring to detect insertions in human by TrEMOLO, but the program always stays at processing the genome.fast…
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Dear Author
First, I like to thank you for your great publication. I have a question about How to add a Virus Genome to the Human hg38 genome to use CAGEfightR. If you don't mind could you please h…
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### Publication and Data Information
https://www.nature.com/articles/s41438-020-0300-x
### Additional Information
### Checklist
See [New Genome Documentation](https://github.com/mestato/stat…
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### Publication and Data Information
https://www.nature.com/articles/s41438-019-0227-2
Looks like there may be RNASeq data as well.
### Additional Information
### Checklist
See [New Genome …
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https://onlinelibrary.wiley.com/doi/full/10.1111/pbi.12875
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Original paper:
https://www.nature.com/articles/ncomms3445
DB:
https://morus.swu.edu.cn/
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### Publication and Data Information
https://www.nature.com/articles/nature06856
This is quite old, lets check around for any newer versions (phytozome, ncbi).
### Additional Information
###…
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I am trying to run query_pan_genome
roughly like this:
query_pan_genome -g clustered_proteins -o output.txt -a difference -i 1.gff,2.gff -t 3.gff
I also tried replacing the -i and -t with --inpu…
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Hello, I am trying run your pipeline on single cell analysis, i have genome C57(maternal)* CAST(Paternal) and CAST(maternal) * C57(paternal) in this case how to use the command python3 python3/pre…