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---
id: amici
version: 0.11.19
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_AMICI/699bfa05a6c57f550eeb2575485ee3878b0c9403/biosimulators.json
specificationsPatc…
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If you open this [OMEX file](https://github.com/opencor/opencor/files/6905083/Cardiac.FTU.txt) (after renaming its extension to `.omex`) and run the simulation you should get something like:
As…
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I will integrate this into the validation of COMBINE archives by BioSimulators utils. See biosimulators/Biosimulators_utils#35.
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This is for BioSimulations
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This is to mirror the metadata in the BioModels database into OMEX metadata files
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We want delete or deprecate "add_curator". After discussion, we agreed that sticking with Dublin Core would be best. They use the more generic "dc:contributor" for everyone who might edit (augment or …
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Run omex file from CombineArchive in tellurium
[tellurium doku](https://tellurium.readthedocs.io/en/latest/notebooks.html#combine-inline-omex)
@JessicaVasseur123
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To my knowledge, libCOMBINE can read and write OMEX manifest files, but only part of COMBINE archives. In some cases, it is useful to be able to work with OMEX manifest files directly. For example, in…
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---
id: netpyne
version: 1.0.0.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/dc6b86d7247f2767fbea4b0db41348ae12d3bf68/biosimulators-netpyne.json
specific…
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Although metadata files appear in manifest XML files, libCOMBINE manifest objects don't show them. This would be helpful for working with the new libOMEXMeta library.
For example, the code below do…