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[PROC] For each connectivity matrix defined, we will calculate the participation coefficient (P) and within-module degree z-score (z) of nodes. A community partition will be derived from the patient’s…
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Hi, I am trying to fetch abstract of around 1000 papers from Pubmed using the `pmid`.
After fetching abstract of about 5-6 papers I get the following error -
```shell
Traceback (most recent call …
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### Script/Job File
```
#!/bin/bash
#$ -pe smp 16
#$ -q UI
#$ -m bea
#$ -M adriana-rivera-dompenciel@uiowa.edu
#$ -o /Shared/vosslabhpc/Projects/CREST/code/fmriprep/out/
#$ -e /Shared/voss…
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Thanks so much for this wonderful package!
I have been struggling though, to get subcortical plots: a standard call to the aseg atlas provided me with symmetrical images. When looking into the atl…
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I attempted to install ggseg using "`remotes::install_github("LCBC-UiO/ggseg", build_vignettes = TRUE)`"
but I got the following error:
√ checking DESCRIPTION meta-information ...
Error in l…
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I read your paper with title "Unsupervised deep learning for Bayesian brain MRI segmentation" in arXiv. I want to try the implementation, but I confused where it has been implemented in this github? I…
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I'm trying to create a dlabel file with ROIs red nucleus, substantia nigra, subthalamic nucleus, Pallidum - internal and external and other freesurfer subcortical ROIs. I'm able to create the volume l…
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"Counts" Section:
- [x] Two "Counts" section headings. I think the first one is probably not necessary
- [x] Typo: "Specifically, it search" --> "Specifically, it searches"
- [x] Typo: "papers wher…
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## The issue
**tl;dr** The Allen Institute ontology classifies hippocampus as part of cortex, not subcortex, which could cause problems for matching some microarray samples to ROIs.
---
When …
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Hi,
I am trying to plot the subcortical regions following the instructions but I can't manage to see them. They are all white regardless of the values entered/colors/... I can manage to reveal them …