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Hi Seurat Team,
Thanks for developing such a useful tool for single-cell genomics
I am confused when using the function named “FindConservedMarkers" in Seurat because of the error :
**Error in name…
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When two lines have the same "title" AND "year" AND "authors" keep only one (the first? the most complete?)
Below the three key in ISI and SCOPUS:
- title --> ISI = TI / Scopus = Title
- year -->…
tommv updated
3 years ago
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**Submitting author:** @TomKellyGenetics (S. Thomas Kelly)
**Repository:** https://github.com/TomKellyGenetics/graphsim
**Version:** v1.0.0-joss
**Editor:** @majensen
**Reviewer:** @rcannood, @corybru…
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Hi,
I have pooled hg19 + mm10 scATAC-seq data, 10X, CellRanger v3 output. Wanted to run signac MergeWithRegions for two different samples, made with same method. Since the data is mixed-species, I …
mliiv updated
4 years ago
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Hi,
First of all ,congratulations on the new package for scATAC.
I was trying to calculate the following on my own dataset
`brain$pct_reads_in_peaks
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As a busy person, I want to drink coffee so that I wake up.
Problem:
Fail to link fastq-file for sample ACC5810A53 in family stablemolly. There are in total ≈50 samples in this family.
Steps …
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**Submitting author:** @TomKellyGenetics (S. Thomas Kelly)
**Repository:** https://github.com/TomKellyGenetics/graphsim
**Version:** 0.1.2
**Editor:** @majensen
**Reviewers:** @rcannood, @corybrunson
…
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In a workshop object, it would be good to know what curriculum was taught (e.g. DC Ecology, SWC with R) and be able to pull out that information so that we can track how often each curriculum is taugh…
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As a busy person, I want to get family name for samples without multiple pipes to cleanup tabulated SQL output in https://github.com/Clinical-Genomics/cg/blob/master/cg/cli/get.py
Problem:
cg get…
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Hello! I'm trying to use `dsub` with the `--tasks` option to run an analysis in 20 chunks. Curiously, the `*.logs` indicate that the script runs to completion for every task, but only some random subs…