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This may include:
- Improve readme, add more details on how to run the app in dev and prod mode, in docker or without
- Add Contributing guide
- Add Code of conduct
- Add Issue templates
- A…
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The [tests in this project](https://github.com/mrc-ide/covid-sim/tree/master/tests), being limited to broad, "smoke test"-style assertions, do not support an assurance that the equations are being exe…
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Hi,
I am trying to use the mugration function and I am getting this error:
File "/Users/nartuhi/miniconda3/bin/treetime", line 12, in
return_code = params.func(params)
File "/Users/…
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Hello @nextstrain/portuguese!
The situation report from 2020-04-10 is ready to be translated to Portuguese. This week’s report is a little bit shorter than usual but hopefully still informative :…
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I went to do a very quick test of the latest `v6` just now, and I'm getting some slightly weird stuff - which seems to be related to the Deprecation warnings ([this commit](https://github.com/nextstra…
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@rneher why I could not find ancestral_reconstruction.py?
ghost updated
6 years ago
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@rneher Where is the ancestral_reconstruction.py?
ghost updated
6 years ago
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@rneher Can ancestral_reconstruction.py be used for amino acid sequences ?
ghost updated
6 years ago
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@emmahodcroft ---
I was just working through the tb tutorial here at https://nextstrain.org/docs/getting-started/tb-tutorial. With my local version of augur (on `master`) and with the lastest versi…
trvrb updated
5 years ago
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David and I just created trees based on Duncan's analysis of the sequences I gained recently. It would be really great if there was a way to reconstruct the sequences at internal nodes of the trees. …