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Hi! I hope all is going good!
I am trying to run gimme motif2factors (v0.17.1, installed through conda/mamba) on the genome of my organism to be able to run ANANSE. I set up a folder for a custom …
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**Current nc variant behaviour is:**
1. Any variants found in the **regulatory_regions db table** of known regulatory regions from FANTOM and Ensembl regulatory build **AND an effect of INTERGENIC_…
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python 3.11
latest version of codonU
Any thing I try within the examples for my file I get "Javascript Error: too much recursion"
any thoughts?
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### 1. Motivation
Exploratory visual QC (#7) and retrievability metrics (#12) analyses showed that: (1) there are patterns in cell count variation across well positions / plates / batches, and (2) …
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### Description
An attempt at creating a test was started [here](https://github.com/The-OpenROAD-Project/OpenROAD-flow-scripts/pull/2300), but a unit-test seems more approperiate.
A eqy unit-test …
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### Description
The motivation is to use this to tweak gui.tcl to "warm up" the GUI to avoid long waiting times while the GUI is running.
Example use-case:
- a new variable, `export GUI_PRELO…
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Dear, developers
Hmm... I have the problem there are no such directories and command not found, I can't figure it out. I am using this script in a package with a full cenote-taker2 installation.
…
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Hi Fanny,
I created a python 2.7 environment in conda, but while installing numpy seems to require python 3.7. Could you help me?
_Originally posted by @GomathiNayagam in https://github.com/fannyh…
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Thanks for the useful tool! I'm running into the following problem:
#### Error
1. Parent features are being suffixed with _0 -- which is breaking parent-child relationships
2. CDS phase is not…
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To simplify the process of creating target data, add a method to `CladeTime` that gets a reference tree based on its `tree_as_of` attribute.
**Definition of Done**
Once complete, users should be abl…