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Given the confusion created by MassMigration events and that fact that we have repeatedly forgotten to set migration rates to zero when populations merge (going backwards in time), I think we should a…
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In some cases, a demographic model could be perfectly valid but ambiguous. For example, take this demography with multiple pulse (MassMigration) events that occur at the same time:
```YAML
descrip…
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[EDIT: fat fingers... I somehow submitted the issue before writing it]
The `DemeGraph` has `split()`, `branch()`, `admix()`, and `merge()`, methods, but the semantics of how these could be used are…
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Right now, if I understand correctly, if a deme has an ancestor, it's end time has to be equal to the ancestors start time, so that ancestor and descendant populations cannot overlap. I think we want …
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As one can see for the following Item, Senior Theses Items imported from submissions for certificate programs are members of multiple collections, one being the departmental collection, the other bein…
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Hi, I used the lc.loter_smooth to get the result. But the result is the classification of each single SNPs. How I can get the introgressed regions? By merging the consecutive SNPs belong to a same sou…
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This is currently out of date and, should be using the ``discrete`` option to RecombinationMap.
Also some important details should be spelled out. @apragsdale, would you mind listing out what needs…
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Hello has already mentioned in #45
release archive-6.0 https://github.com/DReichLab/AdmixTools/archive/v6.0.tar.gz does not build convertf , mergit and also rollof
build of convertf and mergeit w…
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The Browning et al. 2011 American Admixture demographic model has faithfully reproduced a quirk of the originally published model---a small time delta has been added to events to ensure ordering. This…
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After a discussion with @grahamgower this morning, we decided it would be nice to have a *declarative* structure for demography, where we describe what our populations are and how they relate to each …